}
                    newResources.set(i, newResource);
                }
            }
        }
        return newResources;
    }

    private Resource alignToBaseDirectory(Resource resource, Path basedir) {
        if (resource != null) {
            String newDir = alignToBaseDirectory(resource.getDirectory(), basedir);

        // TODO: we should not modify the underlying model here, but resources should be stored
        // TODO: in a separate field in the project, however, that could break v3 plugins
        MavenProject prj = getMavenProject(nonNull(project, "project"));
        org.apache.maven.model.Resource res = new org.apache.maven.model.Resource(nonNull(resource, "resource"));

    <testSourceDirectory>${project.basedir}/src/test/java</testSourceDirectory>
    <resources>
      <resource>
        <directory>${project.basedir}/src/main/resources</directory>
      </resource>
      <resource>
        <directory>${project.basedir}/src/main/resources-filtered</directory>
        <filtering>true</filtering>
      </resource>
    </resources>
    <testResources>
      <testResource>

    </dependency>
  </dependencies>

  <build>
    <resources>
      <resource>
        <directory></directory>
        <includes>
          <include>pom.xml</include>
          <include>src/**</include>
        </includes>
      </resource>
      <resource>
        <directory>src/main/resources</directory>
      </resource>
    </resources>
  </build>

    // default source for this profile is in the pom itself.
    private String source = SOURCE_POM;

    public void setSource(String source) {
        this.source = source;
    }

    public String getSource() {
        return source;
    }

    /**
     * @see java.lang.Object#toString()
     */
    public String toString() {

    }

    protected static File getFileForClasspathResource(String resource)
            throws FileNotFoundException, URISyntaxException {
        ClassLoader cloader = Thread.currentThread().getContextClassLoader();

        URL resourceUrl = cloader.getResource(resource);

        if (resourceUrl == null) {
            throw new FileNotFoundException("Unable to find: " + resource);
        }

        return new File(resourceUrl.toURI());

    </dependency>
  </dependencies>

  <build>
    <resources>
      <resource>
        <directory></directory>
        <includes>
          <include>pom.xml</include>
          <include>src/**</include>
        </includes>
      </resource>
      <resource>
        <directory>src/main/resources</directory>
      </resource>
    </resources>
  </build>

import org.apache.maven.wagon.resource.Resource;

/**
 * Wagon used for test cases that annotate some methods. Note that this is not a thread-safe implementation.
 */
public class TestFileWagon extends FileWagon {
    private TestTransferListener testTransferListener;
    private boolean insideGet;

    @Deprecated

  feedback for that case. However, when offline mode is declared, nothing
  earmarked as remote should be accessed, regardless of whether it is actually
  a physically local resource.

  NOTE: One side-effect of this design change is that all offline-mode code can
  be isolated to maven-core, maven-plugin-descriptor, and [possibly]
  maven-artifact. Usage of maven-wagon will be determined by an offline-aware

      <artifactId>commons-io</artifactId>
      <scope>test</scope>
    </dependency>
  </dependencies>

  <build>
    <resources>
      <resource>
        <filtering>true</filtering>
        <directory>src/main/resources</directory>
      </resource>
    </resources>
    <pluginManagement>
      <plugins>
        <plugin>
          <groupId>org.apache.rat</groupId>