assertTrue("Should have line4", thread.contains("line4"));
        assertTrue("Should have line5", thread.contains("line5"));
    }

    @Test
    public void test_emptyInputStream() throws IOException, InterruptedException {
        Process mockProcess = createMockProcess("");
        JobProcess jobProcess = new JobProcess(mockProcess);

        InputStreamThread thread = jobProcess.getInputStreamThread();

        thread.join(1000);

        assertEquals("All lines should be processed", 5000, receivedLines.size());
        assertEquals("First line", "Line number 0", receivedLines.get(0));
        assertEquals("Last line", "Line number 4999", receivedLines.get(4999));
    }

    @Test
    public void test_run_concurrentAccess() throws InterruptedException {
        String input = "concurrent1\nconcurrent2\nconcurrent3";

        assertEquals("return 1 + 2", activityHelper.normalizeScript("return 1 + 2"));
    }

    @Test
    public void test_normalizeScript_withControlCharacters() {
        assertEquals("line1 line2 line3", activityHelper.normalizeScript("line1\nline2\rline3"));
        assertEquals("tab1_tab2", activityHelper.normalizeScript("tab1\ttab2"));
        // \t -> _, \n -> space, \r -> space, \n -> space

    }

    private static String readWrapperVersion() throws IOException {
        Path props = Paths.get("gradle/wrapper/gradle-wrapper.properties");
        List<String> lines = Files.readAllLines(props, StandardCharsets.UTF_8);
        String distributionUrl =
            lines.stream()
                .map(String::trim)
                .filter(l -> !l.isEmpty() && !l.startsWith("#"))
                .filter(l -> l.startsWith("distributionUrl"))

            long id = 0;
            String line = null;
            while ((line = reader.readLine()) != null) {
                // Remove comments
                final String replacedLine = line.replaceAll("#.*$", StringUtil.EMPTY).trim();

                // Skip empty lines or comment lines
                if (replacedLine.length() == 0) {
                    if (updater != null) {

            long id = 0;
            String line = null;
            while ((line = reader.readLine()) != null) {
                // Remove comments
                final String replacedLine = line.replaceAll("#.*$", StringUtil.EMPTY).trim();

                // Skip empty lines or comment lines
                if (replacedLine.length() == 0) {
                    if (updater != null) {

            long id = 0;
            String line = null;
            while ((line = reader.readLine()) != null) {
                if (line.length() == 0 || line.charAt(0) == '#') {
                    if (updater != null) {
                        updater.write(line);
                    }
                    continue; // ignore empty lines and comments
                }

            long id = 0;
            String line = null;
            while ((line = reader.readLine()) != null) {
                if (line.length() == 0 || line.charAt(0) == '#') {
                    if (updater != null) {
                        updater.write(line);
                    }
                    continue; // ignore empty lines and comments
                }

            long id = 0;
            String line = null;
            while ((line = reader.readLine()) != null) {
                // Remove comments
                final String replacedLine = line.replaceAll("#.*$", StringUtil.EMPTY).trim();

                // Skip empty lines or comment lines
                if (replacedLine.length() == 0) {
                    if (updater != null) {

            content.subList(0, markerPos)
        } else {
            emptyList()
        }

        markdownFile.bufferedWriter().use {
            PrintWriter(it).run {
                for (line in head) {
                    println(line)
                }
                graph(elements.get())
            }
        }
    }

    private fun PrintWriter.graph(elements: List<ArchitectureElement>) {
        println(