assertTrue("Should have line4", thread.contains("line4"));
        assertTrue("Should have line5", thread.contains("line5"));
    }

    @Test
    public void test_emptyInputStream() throws IOException, InterruptedException {
        Process mockProcess = createMockProcess("");
        JobProcess jobProcess = new JobProcess(mockProcess);

        InputStreamThread thread = jobProcess.getInputStreamThread();

        thread.join(1000);

        assertEquals("All lines should be processed", 5000, receivedLines.size());
        assertEquals("First line", "Line number 0", receivedLines.get(0));
        assertEquals("Last line", "Line number 4999", receivedLines.get(4999));
    }

    @Test
    public void test_run_concurrentAccess() throws InterruptedException {
        String input = "concurrent1\nconcurrent2\nconcurrent3";

        String[] inputs = { "input" };
        CharMappingItem item = new CharMappingItem(1L, inputs, "output");

        // Test newline replacement in setNewOutput
        item.setNewOutput("line1\nline2\nline3");
        assertEquals("line1 line2 line3", item.getNewOutput());
    }

    @Test
    public void test_setNewOutput_withNull() {
        String[] inputs = { "input" };

            // Verify content structure
            boolean hasThreadLine = lines.stream().anyMatch(line -> line.startsWith("Thread:"));
            boolean hasStackTraceLine = lines.stream().anyMatch(line -> line.startsWith("\tat "));

            assertTrue("Should contain thread information", hasThreadLine);
            assertTrue("Should contain stack trace information", hasStackTraceLine);

        assertEquals(1, result.size());
        assertEquals("f", result.get(0).getOutput());
    }

    // Test reload with comments and empty lines
    @Test
    public void test_reload_withCommentsAndEmptyLines() throws Exception {
        writeTestFile("# This is a comment\n\na,b => c\n\n# Another comment\nd,e => f\n");

        }
    }

    @Test
    public void test_reload_withEmptyLines() throws Exception {
        // Create content with empty lines and comments
        String content = "# Comment line\n" + "\n" + // empty line
                "word1\n" + "  \n" + // whitespace line (may be treated as content)
                "# Another comment\n" + "word2\n";

        // Write content to test file
        writeTestFile(content);

        stopwordsFile.reload(null, is);

        assertEquals(2, stopwordsFile.stopwordsItemList.size());
        // The content creates two lines: "word\n1" and "word\"
        assertTrue(stopwordsFile.stopwordsItemList.stream().anyMatch(item -> item.getInput().contains("word")));
    }

    // Test StopwordsUpdater inner class
    @Test

        String result = scoreUpdater.execute();

        // Check format with class name, colon, count, and newline
        String[] lines = result.split("\n");
        assertEquals(2, lines.length);
        assertTrue(lines[0].matches("TestScoreBooster : \\d+"));
        assertTrue(lines[1].matches("TestScoreBooster : \\d+"));
    }

    // Test with null pointer exception
    @Test

        assertEquals("return 1 + 2", activityHelper.normalizeScript("return 1 + 2"));
    }

    @Test
    public void test_normalizeScript_withControlCharacters() {
        assertEquals("line1 line2 line3", activityHelper.normalizeScript("line1\nline2\rline3"));
        assertEquals("tab1_tab2", activityHelper.normalizeScript("tab1\ttab2"));
        // \t -> _, \n -> space, \r -> space, \n -> space

        StringBuilder longSubject = new StringBuilder();
        StringBuilder longContent = new StringBuilder();
        for (int i = 0; i < 100; i++) {
            longSubject.append("Subject Line ").append(i).append(" ");
            longContent.append("Content Line ").append(i).append(" with more text. ");
        }

        discloser.setSubject(longSubject.toString());
        discloser.setPlainText(longContent.toString());